Question: repeat-containing TUs in lincRNA
gravatar for dineshtripathy9658
5.0 years ago by
United States
dineshtripathy965810 wrote:

ok, so here i have a pipeline and i have filtered out the lincrna from 454 seq data for a rice cultivar under three conditions. i was going through some paper and i found repeat masker was used to find out repeat containing TUs. why should be the repeat containing transcripts be removed? does it matter, should i remove those containing any of those from the repeat masker output including the simple repeats, satellites also?

rna-seq next-gen • 1.0k views
ADD COMMENTlink modified 4.9 years ago by Biostar ♦♦ 20 • written 5.0 years ago by dineshtripathy965810
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