I would like to calculate conservation score of amino acids from a multiple sequence alignment,I would like to get a simple 2 column table with residue id and conservation score. I came across Mstatx which can do this but i have problems installing this software. Please do let me know if there are other methods.
Thanks in advance
Hi guys and thanks for the links and comments. Very helpful.
I m wondering if there is any code or stand alone script that can also calculate the score and 4dtv. Any one has it?