Question: Realigner Target Creator step- I have been getting this error with all my dataset, if anyone can help me out? I am quite new with Galaxy, so the error message doent make much sense to me.
0
gravatar for bshurovi1
3.7 years ago by
bshurovi10
European Union
bshurovi10 wrote:
 Input files reads and reference have incompatible contigs: No overlapping contigs found.
##### ERROR   reads contigs

alignment software error • 961 views
ADD COMMENTlink modified 3.7 years ago by poisonAlien2.8k • written 3.7 years ago by bshurovi10
1
gravatar for poisonAlien
3.7 years ago by
poisonAlien2.8k
Asgard
poisonAlien2.8k wrote:

Probably chromosome names in reference fasta file does not match the one in your bam file.

ADD COMMENTlink written 3.7 years ago by poisonAlien2.8k
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