Question: how to use SAM (Significance Analysis of Microarrays) for .cel files??
gravatar for sumitha.saseendran
4.7 years ago by
United States
sumitha.saseendran0 wrote:

how do i input SAM with .cel files, now that it is integrated into R? In the manual it is stated that the input file should be in a particular table format, but all the GEO data series that i have, have the raw data in cel file format. I'm new to R and microarray analysis and have no idea how to go about it. Please help!!!

R • 1.5k views
ADD COMMENTlink modified 4.7 years ago by Sean Davis26k • written 4.7 years ago by sumitha.saseendran0
gravatar for Sean Davis
4.7 years ago by
Sean Davis26k
National Institutes of Health, Bethesda, MD
Sean Davis26k wrote:

You can use the oligo Bioconductor package to load and normalize data from .CEL files.

ADD COMMENTlink written 4.7 years ago by Sean Davis26k
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