Question: How to create local database from my sequence for blast search with biopython not in downloaded one
0
gravatar for antutilo
3.3 years ago by
antutilo0
antutilo0 wrote:

Please help! I can't understand how to create a local database from my own sequence. I want localy search some "db" sequences with my own sequences. Why BioPython can't creat a db from my sequences? How can I do my local database?

blast • 2.0k views
ADD COMMENTlink modified 3.3 years ago by mastal5112.0k • written 3.3 years ago by antutilo0
0
gravatar for mastal511
3.3 years ago by
mastal5112.0k
mastal5112.0k wrote:

You can download standalone blastplus and format your sequences into a database using the makeblastdb command.

See the blastplus manual:

http://www.ncbi.nlm.nih.gov/books/NBK279690//a>

ADD COMMENTlink written 3.3 years ago by mastal5112.0k
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