Question: PAML or whole genome
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gravatar for ragavishn
4.9 years ago by
ragavishn20
United States
ragavishn20 wrote:

How to run PAML for the whole genome? I have 100s of bacterial genomes from same species and I want to see what genes are under positive selection. I made the whole genome tree and thinking of running PAML for each gene.

Is there a way to run PAML for the whole genome?

Do I need to create different tree for different genes if all sequences are form same species?

genome • 1.4k views
ADD COMMENTlink written 4.9 years ago by ragavishn20
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