Entering edit mode
8.1 years ago
ragavishn
▴
20
How to run PAML for the whole genome? I have 100s of bacterial genomes from same species and I want to see what genes are under positive selection. I made the whole genome tree and thinking of running PAML for each gene.
Is there a way to run PAML for the whole genome?
Do I need to create different tree for different genes if all sequences are form same species?
