Allelic swaps in raw data snp reports
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8.1 years ago

Can someone please explain the implications of frequently swapped alleles via microarray SNP analysis as seen in raw data reports?

Are algorithms pertaining to phenotypes agnostic to allelic origins?

rs7588043 pos104979 C and T (provider 1)

rs7588043 pos104979 T and C (provider 2)

It is possible the allele columns were just swapped in how they were reported

snp ancestry 23andme microarray • 1.2k views
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