Precalculated Sequence Identities
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12.2 years ago
Sergio ▴ 20

I'm looking for any database/resource with precalculated pairwise sequence identities or similarities containing all against all comparison of Uniprot entries.

Do you know where I can find them?

pairwise sequence similarity • 2.2k views
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12.2 years ago
Hamish ★ 3.2k

The following projects may be of help:

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12.2 years ago
Bill Pearson ★ 1.0k

Also see the UniRef databases from UniProt (http://www.uniprot.org/help/uniref). They are calculated at 100%, 90%, and 50% identity.

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