Question: Alternate of WEGO (Web Gene Ontology Annotation Plotting)
0
gravatar for Rajesh Detroja
3.4 years ago by
INDIA
Rajesh Detroja60 wrote:

Dear All,

If there is any alternate of WEGO that will give Graphical Plotting of Gene Ontology like WEGO please let me know.

WEGO is good, but i have more that 100,000 genes in WEGO format file, which is limitation of WEGO and giving error like,

  #0: File File1_WEGO.txt contains genes sum larger than 100,000!
  #1: File File2_WEGO.txt contains genes sum larger than 100,000!
wego go gene ontology • 1.7k views
ADD COMMENTlink modified 5 weeks ago by y.wang0 • written 3.4 years ago by Rajesh Detroja60

Hey Rajesh, Could you tell me how to prepare the input files for wego and how to start with wego? Thanks so much in advance! Yanting

ADD REPLYlink written 5 weeks ago by y.wang0
0
gravatar for Rajesh Detroja
3.4 years ago by
INDIA
Rajesh Detroja60 wrote:

Finally I have did is by using WEGO it self by editing WEGO file. I have removed those genes IDs which are not assigned by GO Terms so now remaining IDs is under the limitation (100,000) of WEGO.

ADD COMMENTlink modified 3.4 years ago • written 3.4 years ago by Rajesh Detroja60
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