Download Target Sequencing Data And Whole Genome Of Same Individuals

Question

[Vikas Bansal]

Dear all,

This may be a simple (or stupid) question for you all, but I did not get any solution. I want to download target sequencing data (whole exome or some genes) and whole genome of same individuals. This thing can happen in 2 cases- when somebody did exome sequencing (captured) of individuals (may be normal or disease individuals) and then realized that whole genome sequencing is better for these individuals. Secondly, after whole genome sequencing somebody did target sequencing to measure the performance of capture technologies. So far I found this paper, but they worked on single individual and I am looking for group of individuals (like for 10 or 15 individuals). Any suggestions?

Thanks and Best regards,
Vikas

Answer 1

[Wen.Huang]

perhaps 1000 genomes data? I remember they sequenced both whole-genome and whole-exome for some individuals, not sure if you can get the data separately though.

[Vikas Bansal]

Finally, I understood little bit about how data is stored at ftp of 1000 genome project.