Question: mpileup (2.0) not working on local galaxy server
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gravatar for sharmavikas3529
2.9 years ago by
sharmavikas35290 wrote:

Hello everyone I am new in this field. Mpileup show error unable to generate result. Any help would be appreciated. Thank you.

******error: Dataset generation errors Dataset 138: MPileup on data 75 and data 104 The Galaxy framework encountered the following error while attempting to run the tool: Traceback (most recent call last): File "/home/vikas/galaxy/lib/galaxy/jobs/runners/__init__.py", line 166, in prepare_job job_wrapper.prepare() File "/home/vikas/galaxy/lib/galaxy/jobs/__init__.py", line 889, in prepare self.command_line, self.extra_filenames, self.environment_variables = tool_evaluator.build() File "/home/vikas/galaxy/lib/galaxy/tools/evaluation.py", line 445, in build raise e NotFound: cannot find 'fields' while searching for 'reference_source.ref_file.fields.path' Tool execution generated the following error message: cannot find 'fields' while searching for 'reference_source.ref_file.fields.path'

mpileup • 601 views
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