Question: How to create gene-gene/ protein- protein interaction network using Cytoscape?
gravatar for mirza
3.0 years ago by
mirza80 wrote:


I have transcriptome data for a rice-microbe interaction study at different conditions. 1. I want to create interaction networks for few sets of genes using cytoscape.
2. I have the fold change for the genes, do I need to do any other analysis or calculation before starting with cytoscape and if these are possible in cytoscape itself. I will be using cytoscape for the first time, so please help me out.

ADD COMMENTlink written 3.0 years ago by mirza80

I have the same question too.Could you please give me some guidance if you have master the way.Thanks a lot

ADD REPLYlink written 2.9 years ago by 9646128580

sorry, I started working on some other data and haven't found the solution yet! but will let u know, as soon as I get it.

ADD REPLYlink written 2.9 years ago by mirza80
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 564 users visited in the last hour