Question: How to create gene-gene/ protein- protein interaction network using Cytoscape?
1
gravatar for mirza
2.7 years ago by
mirza80
India
mirza80 wrote:

Hi,

I have transcriptome data for a rice-microbe interaction study at different conditions. 1. I want to create interaction networks for few sets of genes using cytoscape.
2. I have the fold change for the genes, do I need to do any other analysis or calculation before starting with cytoscape and if these are possible in cytoscape itself. I will be using cytoscape for the first time, so please help me out.

ADD COMMENTlink written 2.7 years ago by mirza80

I have the same question too.Could you please give me some guidance if you have master the way.Thanks a lot

ADD REPLYlink written 2.6 years ago by 9646128580

sorry, I started working on some other data and haven't found the solution yet! but will let u know, as soon as I get it.

ADD REPLYlink written 2.6 years ago by mirza80
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