Question

Mutation data from ICGC

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7.8 years ago

kofujikura • 0

I want to download the mutation data of 50 specific genes by individuals from ICGC data. Is it possible to get this information without difficult bioinfomatics analysis?

genome • 2.3k views

ADD COMMENT • link updated 7.5 years ago by ivivek_ngs ★ 5.2k • written 7.8 years ago by kofujikura • 0

score 0 · Answer 1 · 2016-11-07

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7.5 years ago

hanpengyong • 0

Hi, recently I try to download some data. But I can't generate the token. How about you? Thanks

ADD COMMENT • link 7.5 years ago by hanpengyong • 0

score 0 · Answer 2 · 2016-11-08

What kind of data are you intended to download, the data security is up now and if I am correct the direct download is as of now disabled unless one request access. It is due to the migration of TCGA to DCC. Better to check this link

I would also suggest taking a look at websites like cBioportal or OASIS or COSMIC (if acconting for somatic mutations). You can get all information of gene-related data for all mutations for samples from there and download this information from there itself.