I want to calculate the rate of heterozygosity in kmer analysis。 I tried to use some software like BBMAP ,genomecope,gce.. But the results were not satisfactory。。 So,I want to know how could i calculate the rate of heterozygosity by myself。
Thank you for your help!
i just want to make sure, K is k-mer size?
Yes, that's correct. I'll edit my answer.