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                    9.1 years ago
        Ming  Tommy  Tang
        
    
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    4.7k
    It is critical to understand how scale parameters work inside the heatmap and heatmap.2 function. It is also critical to choose distance measure and linkage method for heatmap.
I put my 2 cents here http://rpubs.com/crazyhottommy/a-tale-of-two-heatmap-functions
Enjoy!
Tommy
I'm really enjoying this little series. Keep them coming.
I am glad it helps. It took so long to understand heatmap :) and I want to share what I learned.