metabolite mapping - from PDB ligand to KEGG

Question

[bioraghu.iisc]

Dear all

I am having some problem in mapping many of my PDB Ligands (Hetero ID for pdb ligands) to KEGG IDs or Chebi. As i have a large number of ligands, i want in an automated way of the mapped ligands in either KEGG or HMDB/ChEBI.

I found mapping between cheEBI and KEGG, not for PDB Hetero code to KEGG ID. Is there any direct mapping list available?

Pls. suggest

Answer 1

[Prasad]

have you tried biodbnet db2db??

Answer 2

[bioraghu.iisc]

PDB Id Ligand Names SIA sialic acid ATP adenosine triphosphate GLU alpha glucose BTN Biotin HEM Heme

Let's say I have these ligands..i want the corresponding KEGG ID, if found.