Question: Can not import Blast search result on Genius to MEGAN6
1
gravatar for shizuw
3.2 years ago by
shizuw10
shizuw10 wrote:

I am trying to analyze NGS data.

  1. I receive NGS data.
  2. I de novo assembled them in Geneious, resulted in 8000 contigs.
  3. I blast all contains in Genious.
  4. Now I have 8000 blast results in Genious. I would like to transfer this data to MEGAN to analyze.

I am having a problem to transfer blast results in Genous to MEGAN. I do not know which file type I should export in genious.... I stuck here over 3 weeks... any help would be appreciated!

Thank you.

megan next-gen genious • 883 views
ADD COMMENTlink modified 3.2 years ago by Biostar ♦♦ 20 • written 3.2 years ago by shizuw10

I've exported Geneious BLAST results in .txt, .xml, and .sam. None of these worked with "Import BLAST" in MEGAN. Interested to see if this gets solved.

ADD REPLYlink written 3.2 years ago by mtgasser0
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