How can I extract sequence from the human reference that maps to end sequences from FOSMIDs?
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7.5 years ago
SaltedPork ▴ 170

I have 5 Fosmids in fasta format, and I want to take the end sequences (around 300 bases) and use those to find the whole sequence inside the reference. Would I BLAT them, find coordinates and enter that into UCSC browser? Or is there a better way?

fosmid human reference • 1.0k views
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