Variant Effect Predictor API, dbSNP annotation
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Entering edit mode
7.4 years ago
dr.dimo • 0

Quick question for those running VEP using local API, if I am looking to annotate variant calls does VEP annotate dbSNP rs numbers or do you need to do that prior to running VEP (with something like SnpSift)?

EDIT: never mind, completely missed the ­­--check_existing flag.

Carry on, nothing to see here :)

annotation • 1.6k views
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