how to save pdb file from autodock vina docking result
I am visualizing autodock vina results using PyMOL:
I open out.pdbqt (containing 9 docked conformations of ligand) I open pr.pdb (containing protein structure)
I want to have 1 pdb file containing one of conformations of ligand (for example number 1 which is the best pose) + protein structure. To this, I used File, Save molecule,
How to select both of them?
Any help will highly appreciated?