Question: is there any source for TF(transcription factor)-TG(target gene)?
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gravatar for Kurban
2.5 years ago by
Kurban170
china/Urumqi/xinjiang academy of animal scinces
Kurban170 wrote:

Hello guys, I have more than 800 animal transcription factor sequences from ensemble. I want to find their target gene sequences. Could anyone tell how could I do that? Is there any source (or database) for TF(transcription factor)-TG(target gene) information of Drosophila Melanogaster and Caenorhabditis Elegans?

sequence • 870 views
ADD COMMENTlink modified 2.5 years ago by Macspider2.8k • written 2.5 years ago by Kurban170

Quite a few tools and suggestions on this Biostar question: How To Identify Targets Of A Transcription Factor?: How To Identify Targets Of A Transcription Factor ?

ADD REPLYlink written 2.5 years ago by Tonor420
0
gravatar for Macspider
2.5 years ago by
Macspider2.8k
Vienna - BOKU
Macspider2.8k wrote:

DBD might be what you are looking for. Even though I'm not that expert.

ADD COMMENTlink written 2.5 years ago by Macspider2.8k
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