Question: MSMS simulation tool
gravatar for prostoesh
3.9 years ago by
Russian Federation
prostoesh10 wrote:

Anyone knows how to run MSMS? I am trying to simulate a scenario, where a population splits 2 times (separately), resulting in 3 subpopulations. I used a command

msms -ms 5 3 -t 5 -N 5000000 -I 3 5 0 0 -es 1.5 1 0.5 -es 7.5 1 0.5

but when i parse the output in R's PopGenome with


i got a list of 1 population, not 3!

is there a way to make this work? i've read the manuals for both ms and msms, but i still got a feeling i'm not 100% sure what exactly i am doing

msms software error • 1.4k views
ADD COMMENTlink modified 3.9 years ago • written 3.9 years ago by prostoesh10
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