Question: (Closed) multiple genome sequence alignment tools
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gravatar for rajesh
2.3 years ago by
rajesh 60
India/Chandigarh/
rajesh 60 wrote:

hii everyone I am working on bacterial genomics and i have ~ 50 draft genomes and i want to align them. Can anybody suggest me the tools which take submission of all these draft sequence in a single batch simultaneously i want to use it for recombinational analysis. please suggest how i can use it in RDP software. Thanks in advance....

ADD COMMENTlink written 2.3 years ago by rajesh 60

See this post - there are many tools enumerated in the middle of it.

Any Software To Do Multiple Genome Alignment For Bacterial Genomes?

This is summary of known RDP-tools:

http://www.aol-soft.com/rdp

This site below looks good for RDP, but no batch software...

http://en.bio-soft.net/dvdlist.htm

In github there is some tool for it, test it - i've never used it:

https://github.com/stascorp/rdpwrap

ADD REPLYlink modified 2.3 years ago • written 2.3 years ago by natasha.sernova3.4k

Hello rajesh !

We believe that this post does not fit the main topic of this site.

OP does not respond to posts after asking questions. Question closed until OP responds.

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

ADD REPLYlink written 16 months ago by RamRS21k
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