Question: update SNP annotation in map file by Oar_v 4.0
gravatar for mnosrati669
4.1 years ago by
Iran, Islamic Republic Of
mnosrati6690 wrote:

Hello All. I study about Run of Hemozygosity in sheep. I have file in plink format (ped & map) for 50k Ovine beadchip. my map file were contracted base one Oar3.1. as you know in 2015/11/20 new genome assemblies of Oar_v4.0 was released. now, these are my questions:

1- do I should update my map file base on new assembly?

2- how can I do this?

I am sorry if my question is simple, I am new in bioinformatic analysis.

thanks alot

snp assembly genome • 962 views
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