Question: Assign correct bootstrap value

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listerr01 •

**0**wrote:I'm a bit confused about whether Node A in the Original Neighbor-joining tree can be considered to have been recovered in the bootstrap replicate tree in the following examples. Can anybody suggest an algorithm for a quick comparison of each bootstrap replicate with the original tree for each node? Note that I am not looking for an existing program, but an algorithm that helps make the comparison programmatically.

Thanks.

Hopefully the new links to Flickr work now. Would appreciate some help about whether Node A in the Original Neighbor-joining tree can be considered to have been recovered in the bootstrap replicate tree. I'm looking for an algorithm for a quick comparison of each bootstrap replicate with the original tree for each node? Note that I am not looking for an existing program, but an algorithm that helps make the comparison programmatically. Thanks.

Link to original (Neighbor-joining) tree: https://www.flickr.com/gp/150972054@N04/99055R Link to bootstrap replicate: https://www.flickr.com/gp/150972054@N04/72006b

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