Off topic: Need help to choose 2-3 genome annotation software from the list at https://omictools.com/genome-annotation-category

Question

[human_genomeXXX]

Need help to choose 2-3 genome annotation software from the list at https://omictools.com/genome-annotation-category Input will be a VCF files generated from the Pilon, BBMap, GATK and NextGene. Please do not propose SNPEff and VCFAnnotator. Objects of research --- M.Tuberculosis, E. coli, Staf. and Strept. Not a human genome. Thanks.