Closed:How to design matrix for LIMMA between control and stress conditions to calculate logFC and p-value.

Question

[asnanizami]

I am new to data sciences and R programming. I have normalized data files separate for control and diseased conditions. It has Gene ID as rows and expression values as columns. How do I design a matrix for LIMMA to calculate logFC, P-Value and adjusted P-Value between control and stress conditions. And what input data file should I provide as input for the lmFit function so that it compares between control and stress data sets.