Trimming gapped ends from a multiple alignment error
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7.2 years ago
a.moner • 0

Hi, there is a previous post Trimming gapped ends from a multiple alignment. I tried it but I got this error cut: invalid byte, character or field list. can someone help me with that THANKS

alignment R next-gen sequence • 1.3k views
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Hi, please include the link to the previous post in your question. Also, include the R libraries and the commands you used that ended up in error. Ideally, a minimum reproducible example (that is, code that we can copy/paste and run in our computers in order to reproduce the error). If not, the output of traceback() and sessionInfo() could be valuable to anyone trying to help.

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hi this is the link to the previous post C: Trimming gapped ends from a multiple alignment

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There are several suggestions in that post. Which one you used? You tagged your question as R, but none of the options offered in that post are about R scripts (there is one bash script). Do you want to do this in R?

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yes I used bash script trimend.sh

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