Generating Heatmap before and after RUVSeq factor in RNA-Seq

Question

[swordbreadjj]

Hi all,

My question was how to apply RUV factors to raw counts before (and after) generating a heatmap.

In the case of Combat function, the adjusted datasets were returned.

Is there a way to apply the RUV factors to the raw counts to generate the heatmap?

Thanks for your help,

similar post : Heatmap before and after RUVSeq