Question: clustering peptide sequences
0
gravatar for elmira b
23 months ago by
elmira b40
United States
elmira b40 wrote:

Hi,

Thanks for reading my post.

What would you suggest to use for clustering a large set of peptide sequences with given intensities? Based on my quick search, UCLUST, CD-HIT, AAindex, GibbsCluster do a descent job for sequence alignment . I am interested in reducing the size of the dataset by using the centroids of these sequence clusters.

Thank you so much for your help.

peptide clustering • 564 views
ADD COMMENTlink modified 23 months ago • written 23 months ago by elmira b40
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