Question: problem with intersectBed
gravatar for mra8187
22 months ago by
mra818720 wrote:

Dear all i have problem with intersectBed . my script is : intersectBed -v -wa -a '/media/mra/14067F666B6A1119/W1-raw.pileup' -b '/home/mra/widows.bed' > khoroji

error is :

ERROR: file /media/mra/14067F666B6A1119/W1-raw.pileup has non positional records, which are only valid for the groupBy tool.

what is wrong with my script or data ?

snp rna-seq • 633 views
ADD COMMENTlink modified 12 months ago by Biostar ♦♦ 20 • written 22 months ago by mra818720

post output from head /media/mra/14067F666B6A1119/W1-raw.pileup

ADD REPLYlink modified 22 months ago • written 22 months ago by venu6.0k
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