problem with intersectBed
0
0
Entering edit mode
7.4 years ago
mra8187 ▴ 20

Dear all i have problem with intersectBed . my script is : intersectBed -v -wa -a '/media/mra/14067F666B6A1119/W1-raw.pileup' -b '/home/mra/widows.bed' > khoroji

error is :

ERROR: file /media/mra/14067F666B6A1119/W1-raw.pileup has non positional records, which are only valid for the groupBy tool.

what is wrong with my script or data ?

RNA-Seq snp • 1.5k views
ADD COMMENT
1
Entering edit mode

post output from head /media/mra/14067F666B6A1119/W1-raw.pileup

ADD REPLY

Login before adding your answer.

Traffic: 1217 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6