Question: Gene expression based risk score
0
gravatar for Govardhan Anande
2.6 years ago by
Australia
Govardhan Anande130 wrote:

Hello,

I have identified 11 prognostic genes using LASSO Cox model using 200 samples (https://web.stanford.edu/~hastie/Papers/Glmnet_Vignette.pdf).

Now I would like to calculate risk score to every sample based on expression of these 11 prognostic genes and I would really appreciate if anyone can suggest me some R package or tool to do the same.

Thanks in advance.

Cheers, Gova

ADD COMMENTlink modified 10 months ago by zhaoliang03020 • written 2.6 years ago by Govardhan Anande130
0
gravatar for zhaoliang0302
10 months ago by
zhaoliang03020 wrote:

Hi, Have you solved it? I meet the same problem, if you know can you tell me? Thanks

ADD COMMENTlink written 10 months ago by zhaoliang03020
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2012 users visited in the last hour