Question: Gene expression based risk score
0
gravatar for Govardhan Anande
22 months ago by
Australia
Govardhan Anande130 wrote:

Hello,

I have identified 11 prognostic genes using LASSO Cox model using 200 samples (https://web.stanford.edu/~hastie/Papers/Glmnet_Vignette.pdf).

Now I would like to calculate risk score to every sample based on expression of these 11 prognostic genes and I would really appreciate if anyone can suggest me some R package or tool to do the same.

Thanks in advance.

Cheers, Gova

ADD COMMENTlink modified 26 days ago by zhaoliang03020 • written 22 months ago by Govardhan Anande130
0
gravatar for zhaoliang0302
26 days ago by
zhaoliang03020 wrote:

Hi, Have you solved it? I meet the same problem, if you know can you tell me? Thanks

ADD COMMENTlink written 26 days ago by zhaoliang03020
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