Entering edit mode
6.8 years ago
ezrabekele17
▴
10
Hi,
I'm looking for a package in R that can preprocess 27k methylation idat files and convert it to beta values. I know minfi will work for 450k files.
One idea I had for the 27k is to use methylumi to get the rgset and then use minfi to do the rest of the processing. Will that work?
Any other packages and ideas are appreciated.
