Question: Does minfi's read.metharray() support all methylation arrays (27k, 450k, and EPIC)?
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2.4 years ago by
ezrabekele170 wrote:

Does anyone know if minfi's read.metharray function supports all methylation arrays (27k, 450k, and EPIC)?

At the top of the documentation (https://bioconductor.org/packages/devel/bioc/manuals/minfi/man/minfi.pdf), it says "27k isn't supported", but when I read the documentation for read.metharray, it says "The type of methylation array is guess by looking at the number of probes in the IDAT files." So does that mean it only supports 450k and EPIC? or does it mean it support all 3?

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ADD COMMENTlink written 2.4 years ago by ezrabekele170
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