Validating SNP calls quality
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6.6 years ago
jomare1188 ▴ 10

Hi, I'm working with GBS data and i used Stacks and ipyrad to call de novo based SNP's, apart from the quantity of SNP's called by each software what else can i use to validate the quality of each pipeline?

it is possible to measure the accuaracy of the de novo based called SNP's ?

SNP • 1.3k views
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