Question: PC Plot troubles
gravatar for rachel.kubik12
2.7 years ago by
rachel.kubik12120 wrote:

Hello! I am attempting to make a PC plot of my gene expression data. I have a read count matrix with my transcript IDs for the row names and the sample IDs as the column names. I have around 32 samples and over 22000 transcripts. I'm not sure the best way to go about this. I have been attempting it on R studio and through edgeR. I have been searching online and I have found a few different examples but I cant get any of them to work.

If anyone has any ideas I could try or could point me in the right direction, that would be awesome!


rna-seq R • 572 views
ADD COMMENTlink modified 2.7 years ago by Friederike5.8k • written 2.7 years ago by rachel.kubik12120

which commands have you tried and what were the errors you encountered?

ADD REPLYlink written 2.7 years ago by Friederike5.8k
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