Question: What Blosum matrix to use for ortholog table?
0
gravatar for jespinoz
17 months ago by
jespinoz20
jespinoz20 wrote:

I want to create a protein ortholog table between Arabidopsis thaliana and an algae. I'm wondering what the best blosum matrix to use for this task would be. I'm using blosum50 right now but I'm not sure if there is a more appropriate one for organisms that are this divergent.

ADD COMMENTlink written 17 months ago by jespinoz20
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 789 users visited in the last hour