Performing Blast/Smithwaterman Searches Directly From My Application
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11.6 years ago
Brandstaetter ▴ 270

Bringing in my questions from stackoverflow:

I'm working on a small application and thinking about integrating BLAST or other local alignment searches into my application. My searching has only brought up programs, which need to be installed and called as an external program.

Is there a way short of me implementing it from scratch? Any pre-made library perhaps?

blast c sequence • 2.1k views
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5
Entering edit mode
11.6 years ago
Phis ★ 1.1k

Also the SeqAn C++ library may be useful to some.

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2
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11.6 years ago
Brandstaetter ▴ 270

I found the NCBI C++ Toolkit to be quite useful.

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