Association with snptest

Question

[s.spurton]

Hi all,

I would like to impute a region of n SNPs in a locus of interest, in order to perform an association test with snptest. Is there a way to do it?

Many thanks, Ben

Answer 1

[NB]

Yes, there are ways to do it. You can impute your data using the Michigan server

Answer 2

[steph15pitts]

Hi You can impute your data using the Michigan Imputation server, Sanger Imputation server, or using your own scripts to impute using software such as IMPUTE2.