Question: Missing Interaction Frequencies
0
gravatar for Dogancan
2.6 years ago by
Dogancan30
Dogancan30 wrote:

Hello everybody,

I have a .hic data in which I converted to sparse-triangular format chr-by-chr. After I convert the matrix to a full matrix I saw that there are some holes in the matrix that did not even have 0, or Na value. Is there any way to fill the matrix to make it a symmetric and complete? For example, the bin size is 100K and there is no interaction information for 100000 and 200000. And I need fill this out as zero or Na.

Hope my question is clear.

Best Regards,

Dogancan

hic hi-c • 500 views
ADD COMMENTlink written 2.6 years ago by Dogancan30
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1208 users visited in the last hour