Question: Does a no-normal pipeline exist for MuSiC?
8 months ago by
MMa • 250
MMa • 250 wrote:
We have a large set of tumor-only WES data that we want to run
music smg. However, it's unclear from the documentations on whether:
- Matched tumor-normal bam files are required for
music smgper se,
music bmr calc-bmris necessary before running
music smg, and
- I can use the output from
music bmr calc-wig-covginstead of
music bmr calc-covgas the input of
music bmr calc-bmr.
I would like previous users to give us more insight on this. Thanks!
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