How To Import Tsv-File In Gene Ontology Or Annotate-It?

0

Entering edit mode

11.1 years ago

jone.vanluyten • 0

We made tsv-files with SIFT of 17 T-ALL cell lines (T-cell acute lymphoblastic leukemia) and we only used chromosome 4. Now we want to use them in the Gene Ontology Enrichment Analysis Software Toolkit. But we always get this error: "Error: Not allowed type 'application/octet-stream' of your upload file!" We also made a csv-file with Annovar (transformed to Excel), but we also don't get a result. Than we tried to use 'Annotate-It' in stead of Gene Ontology and that gave us 'Error' again... How do you import tsv-files in Gene Ontology? Did we miss a step? What files can you import in Gene Ontology?

gene ontology annotation • 3.3k views

ADD COMMENT • link updated 10.5 years ago by Biostar 20 • written 11.1 years ago by jone.vanluyten • 0

0

Entering edit mode

how did you create the TSV file ? What is the file extension ? Can you open your file with a very simple text editor like "NotePad" ?

ADD REPLY • link 11.1 years ago by Pierre Lindenbaum 161k

0

Entering edit mode

I have obtained .tsv file from "virtual-Normal Correction" method which gives us somatic mutations.Can anyone suggest me how to annotate this file? Thanks

ADD REPLY • link 5.8 years ago by vivekruhela ▴ 20

Login before adding your answer.