Question: differentially methylated bed file from encode
0
gravatar for christacaggiano
10 weeks ago by
UCSF
christacaggiano20 wrote:

I am looking to compile all the tissues profiled in the ENCODE WGBS and RRBS experiments into one matrix, and find all the differentially methylated regions, which has turned out to be a monumental amount of data. I'm looking for something similar to the roadmap fractional methylation calls found here

I realize that I can't be the first person to want to use DMRs from this dataset- I have seen many papers on it. However, I can't seem to find this processed data anywhere. I can only find individual bed files. Does anyone know where I can find a matrix like this? I would be very grateful for hours of saved time!

wgbs methylation encode • 131 views
ADD COMMENTlink written 10 weeks ago by christacaggiano20
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 806 users visited in the last hour