Question: How to Parse a Merged VCF File into Gene-by-Gene data Across Samples?
gravatar for nighralf
15 months ago by
nighralf0 wrote:

I have a 6 sample merged VCF file and I am trying to run a gene-by-gene association tool on the data. To do this I am looking for suggestions on how I might separate the VCF into gene by gene data? I would struggle to write my own python script to run this so would preferably like tool recommendations if possible!!

vcf genotype parse exome genome • 434 views
ADD COMMENTlink written 15 months ago by nighralf0

What does gene by gene mean in this context? Can you provide an example of the output you want?

ADD REPLYlink written 15 months ago by jared.andrews074.1k
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