Question: How to query taxonomy ID using protein accession ID in NCBI or Uniprot?
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gravatar for johnnytam100
8 months ago by
johnnytam100100
johnnytam100100 wrote:

I want to query a list of taxonomy ID of the proteins using a list of the protein accession ID in NCBI or Uniprot.

Does NCBI or Uniprot provide a file which correlates the taxonomy ID, protein accession ID etc. in a table format?

Thank you!

uniprot taxonomy ncbi • 308 views
ADD COMMENTlink modified 8 months ago • written 8 months ago by johnnytam100100

Solved. Download from ftp://ftp.ncbi.nlm.nih.gov/pub/taxonomy/accession2taxid/ as suggested by Sej Modha here

ADD REPLYlink written 8 months ago by johnnytam100100
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