RepeatModeler run error troubleshooting
Entering edit mode
5.4 years ago
Anand Rao ▴ 630

I believe I am having trouble with the BuildDatabase step (for some inputs, but not all) And that this is causing subsequent non-0 exit status of my runs

I have described my errors at:

and to make sure my input file formatting and the modified syntax I am using are not introducing errors, I have posted additional questions at:

While a reply from the author(s) is best-case scenario, I've noticed that several threads on their Github were answered after a few months' wait time.

So, I hope someone with experience running the latest version of RepeatModeler and it's dependencies, can help me out with my troubleshooting. Thanks, in advance!

RepeatModeler RepeatMasker BuildDatabase blastdb • 1.6k views

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