Hi, I'm new to Microsatellite instability and trying to work on msiSENSOR tool. I tried uploading a bam file in msisensor using the command:
msisensor -d microsatellites.list -t tumor.bam -o output.tumor.prefix
And it says: failed to open homopolymers and microsatellites file I checked the path and it is correct. Could any one tell me what has gone wrong and how I must troubleshoot?