Question: Annotate CpG Islands for a new genome
0
gravatar for Jautis
10 weeks ago by
Jautis270
United States
Jautis270 wrote:

Hello, we've sequenced a mammalian genome (~3.2gb) and are looking to annotate CpG islands. Ideally, we would get something like the UCSC annotation tracts, but I can't find a public pipeline for doing CpG island calling. Can anyone point me in the right direction? Thank you very much!

annotation cpg assembly • 216 views
ADD COMMENTlink modified 10 weeks ago by vkkodali1.1k • written 10 weeks ago by Jautis270
1
gravatar for vkkodali
10 weeks ago by
vkkodali1.1k
United States
vkkodali1.1k wrote:

See: A: CpG islands for ARS-UCD1.2 Bos taurus genome?

ADD COMMENTlink written 10 weeks ago by vkkodali1.1k
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