Entering edit mode
5.0 years ago
thal.kan49
•
0
Hello, I'm trying to follow de Limma package to analyse some RNA-Seq data. The workflow works clearly but I've some problems with the alternate splicing:
> diffSplice(fit, geneid = "GeneID", exonid = "Start")
Total number of exons: 16772
Total number of genes: 16772
Number of genes with 1 exon: 16772
Mean number of exons in a gene: 1
Max number of exons in a gene: 1
Error in diffSplicefit.de, geneid = "GeneID", exonid = "Start") :
No genes with more than one exon
I don't find where is the problem, may someone help me to fix this problem if possible. Best regards.