Issue with renaming METAL output
1
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Entering edit mode
5.1 years ago
anamaria ▴ 220

Hi,

I am trying to run my metal script like this:

metal < metal_script

metal_script looks like this:

# Describe and process the input files
MARKER   rsid
ALLELE   alleleA alleleB
EFFECT   frequentist_add_beta_1
STDERR   frequentist_add_se_1
PVAL     frequentist_add_pvalue

PROCESS chr16_edic.txt
PROCESS chr16_gokind.txt

OUTFILE meta_chr16.txt
ANALYZE

the issue is that I'm not getting in output the meta_chr16.txt file, as I named in in the script, but rather this generic names: METAANALYSIS1.TBL

Does anyone know why is this?

Thanks Ana

metal • 2.1k views
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1
Entering edit mode
5.1 years ago
anamaria ▴ 220

it seems that it has to be specified as this:

OUTFILE META_CHR16_  .txt
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