Question: Issue with renaming METAL output
0
gravatar for anamaria
12 months ago by
anamaria90
anamaria90 wrote:

Hi,

I am trying to run my metal script like this:

metal < metal_script

metal_script looks like this:

# Describe and process the input files
MARKER   rsid
ALLELE   alleleA alleleB
EFFECT   frequentist_add_beta_1
STDERR   frequentist_add_se_1
PVAL     frequentist_add_pvalue

PROCESS chr16_edic.txt
PROCESS chr16_gokind.txt

OUTFILE meta_chr16.txt
ANALYZE

the issue is that I'm not getting in output the meta_chr16.txt file, as I named in in the script, but rather this generic names: METAANALYSIS1.TBL

Does anyone know why is this?

Thanks Ana

metal • 363 views
ADD COMMENTlink modified 8 months ago by Biostar ♦♦ 20 • written 12 months ago by anamaria90
1
gravatar for anamaria
12 months ago by
anamaria90
anamaria90 wrote:

it seems that it has to be specified as this:

OUTFILE META_CHR16_  .txt
ADD COMMENTlink written 12 months ago by anamaria90
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1515 users visited in the last hour